STRINGSTRING
PBAL39_23752 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23752" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23752Uncharacterized protein (526 aa)    
Predicted Functional Partners:
PBAL39_18789
Putative endo-1,4-beta-xylanase (494 aa)
   
          0.699
PBAL39_23727
Uncharacterized protein (539 aa)
   
          0.639
PBAL39_20855
Arabinan endo-1,5-alpha-L-arabinosidase A (325 aa)
   
          0.609
PBAL39_23882
Probable malate/L-lactate dehydrogenase (362 aa)
   
          0.582
PBAL39_01967
Uncharacterized protein (454 aa)
   
          0.528
PBAL39_23747
Glucose/sorbosone dehydrogenase (494 aa)
              0.500
PBAL39_05098
Mandelate racemase/muconate lactonizing enzyme-like protein (406 aa)
   
          0.433
PBAL39_15279
Oxidoreductase (402 aa)
   
          0.429
PBAL39_21770
4-hydroxyphenylpyruvate dioxygenase (403 aa)
   
          0.414
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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