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STRINGSTRING
EDM36090.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36090.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36090.1annotation not available (366 aa)    
Predicted Functional Partners:
EDM36091.1
annotation not available (392 aa)
 
          0.947
EDM36092.1
Putative outer membrane protein; Probably involved in nutrient binding (643 aa)
 
          0.938
EDM36093.1
Probably involved in nutrient binding; COG4206 Outer membrane cobalamin receptor protein (1155 aa)
 
          0.936
EDM34481.1
annotation not available (422 aa)
   
          0.777
EDM34482.1
Putative outer membrane protein; Probably involved in nutrient binding (640 aa)
   
          0.773
EDM37150.1
annotation not available (410 aa)
   
          0.769
EDM37151.1
annotation not available (640 aa)
   
          0.768
EDM34483.1
Probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport (1080 aa)
   
          0.753
EDM37152.1
Probably involved in nutrient binding; COG4206 Outer membrane cobalamin receptor protein (1070 aa)
   
          0.739
EDM34754.1
annotation not available (667 aa)
   
          0.684
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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