STRINGSTRING
PBAL39_23903 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23903" - ROK in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23903ROK (373 aa)    
Predicted Functional Partners:
PBAL39_25545
Disproportionating enzyme (1344 aa)
     
    0.861
nagA
N-acetylglucosamine-6-phosphate deacetylase (373 aa)
 
 
  0.844
PBAL39_24248
N-acetylglucosamine-6-phosphate deacetylase (401 aa)
 
 
  0.827
PBAL39_24238
6-phosphogluconolactonase (249 aa)
 
 
  0.781
PBAL39_17484
Phosphomannomutase (577 aa)
 
   
  0.751
pgi
Phosphohexose isomerase (548 aa)
       
  0.748
PBAL39_24480
Glucosamine-6-phosphate deaminase-like protein (639 aa)
     
  0.744
PBAL39_01842
Aldehyde-alcohol dehydrogenase (876 aa)
       
  0.715
dapA
4-hydroxy-tetrahydrodipicolinate synthase ; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (299 aa)
   
 
  0.711
PBAL39_14494
Transketolase (809 aa)
       
  0.705
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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