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PBAL39_23953 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23953" - Putative TonB-dependent receptor exported protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23953Putative TonB-dependent receptor exported protein (788 aa)    
Predicted Functional Partners:
PBAL39_19230
Putative hemin receptor (496 aa)
   
          0.761
PBAL39_05483
Putative outer membrane protein (431 aa)
   
          0.729
PBAL39_05468
Uncharacterized protein (171 aa)
   
          0.707
PBAL39_21830
Uncharacterized protein (280 aa)
   
          0.693
PBAL39_09501
Gliding motility-related protein (270 aa)
   
          0.650
PBAL39_13832
Uncharacterized protein (811 aa)
   
          0.644
PBAL39_06556
Uncharacterized protein (274 aa)
   
          0.625
PBAL39_10071
TonB (659 aa)
   
          0.613
PBAL39_11562
Uncharacterized protein (542 aa)
   
          0.610
PBAL39_10601
Putative TonB-dependent transmembrane receptor protein (823 aa)
   
          0.602
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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