STRINGSTRING
PBAL39_24013 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24013" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24013Uncharacterized protein (120 aa)    
Predicted Functional Partners:
PBAL39_24018
Na+/H+ antiporter (760 aa)
              0.859
PBAL39_24023
Uncharacterized protein (345 aa)
              0.815
PBAL39_24008
Riboflavin biosynthesis protein (311 aa)
              0.775
PBAL39_24003
Uncharacterized protein (287 aa)
              0.775
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (258 aa)
              0.763
PBAL39_23993
Undecaprenol kinase (Bacitracin resistance protein) (238 aa)
              0.683
PBAL39_23988
Uncharacterized protein (73 aa)
              0.497
PBAL39_23983
Cell division protein FtsX (292 aa)
              0.497
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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