STRINGSTRING
PBAL39_24028 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24028" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24028Uncharacterized protein (206 aa)    
Predicted Functional Partners:
PBAL39_24033
UvrABC system protein A ; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (937 aa)
              0.819
PBAL39_09581
Uncharacterized protein (293 aa)
   
          0.775
PBAL39_11587
Uncharacterized protein (1110 aa)
   
          0.771
PBAL39_21395
Uncharacterized protein (681 aa)
   
          0.766
PBAL39_10526
Uncharacterized protein (475 aa)
   
          0.764
PBAL39_09601
Uncharacterized protein (580 aa)
   
          0.763
PBAL39_06206
Probable integral outer membrane protein (566 aa)
   
          0.763
PBAL39_04323
Uncharacterized protein (1168 aa)
   
          0.762
PBAL39_24320
TonB (215 aa)
   
          0.759
PBAL39_08070
Uncharacterized protein (694 aa)
   
          0.756
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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