STRINGSTRING
PBAL39_24183 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24183" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24183Putative outer membrane protein (524 aa)    
Predicted Functional Partners:
PBAL39_24188
Putative outer membrane protein (994 aa)
 
          0.928
PBAL39_23893
Uncharacterized protein (524 aa)
   
          0.769
PBAL39_07865
Putative outer membrane protein (466 aa)
   
          0.768
PBAL39_18699
Putative outer membrane protein (1175 aa)
   
          0.766
PBAL39_23898
Putative outer membrane protein (1088 aa)
   
          0.765
PBAL39_23687
Uncharacterized protein (301 aa)
   
          0.758
PBAL39_00350
Putative outer membrane protein (993 aa)
 
          0.741
PBAL39_24490
Putative outer membrane protein (1045 aa)
 
          0.733
PBAL39_03779
Uncharacterized protein (474 aa)
   
          0.733
PBAL39_03774
Putative outer membrane protein (1000 aa)
 
          0.729
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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