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STRINGSTRING
EDM34643.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34643.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34643.1annotation not available (371 aa)    
Predicted Functional Partners:
EDM34641.1
Uncharacterized protein; COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase (731 aa)
 
          0.879
EDM34644.1
Putative outer membrane protein; Probably involved in nutrient binding (533 aa)
 
          0.850
EDM34642.1
COG3867 Arabinogalactan endo-1,4-beta-galactosidase (348 aa)
 
          0.841
EDM34645.1
annotation not available (992 aa)
 
          0.839
EDM34640.1
COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family (821 aa)
              0.738
EDM37968.1
annotation not available (436 aa)
   
          0.690
EDM34336.1
annotation not available (337 aa)
   
          0.689
EDM34693.1
annotation not available (787 aa)
   
          0.674
EDM34646.1
Two-component system sensor histidine kinase/response; COG3292 Predicted periplasmic ligand-binding sensor domain (1354 aa)
 
          0.618
EDM38507.1
annotation not available (295 aa)
   
          0.578
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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