STRINGSTRING
PBAL39_24223 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24223" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24223Putative outer membrane protein (533 aa)    
Predicted Functional Partners:
PBAL39_24228
Uncharacterized protein (992 aa)
 
          0.970
PBAL39_08616
Putative lipoprotein (337 aa)
 
          0.851
PBAL39_08626
Uncharacterized protein (993 aa)
 
          0.798
PBAL39_13310
Putative outer membrane protein (1009 aa)
 
          0.780
PBAL39_24233
Two-component system sensor histidine kinase/response (1354 aa)
 
          0.764
PBAL39_22887
Putative outer membrane protein (1055 aa)
 
          0.763
PBAL39_24208
Uncharacterized protein (731 aa)
 
          0.756
PBAL39_08606
Putative alpha-amylase (592 aa)
 
          0.749
PBAL39_13305
Uncharacterized protein (969 aa)
   
          0.748
PBAL39_17199
Putative outer membrane protein (1015 aa)
 
          0.743
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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