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PBAL39_24238 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24238" - 6-phosphogluconolactonase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_242386-phosphogluconolactonase (249 aa)    
Predicted Functional Partners:
PBAL39_24248
N-acetylglucosamine-6-phosphate deacetylase (401 aa)
  0.992
nagA
N-acetylglucosamine-6-phosphate deacetylase (373 aa)
  0.959
pgi
Phosphohexose isomerase (548 aa)
   
 
  0.897
glmS
L-glutamine--D-fructose-6-phosphate amidotransferase ; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (612 aa)
   
 
  0.872
PBAL39_24480
Glucosamine-6-phosphate deaminase-like protein (639 aa)
   
   
 
0.869
PBAL39_14494
Transketolase (809 aa)
   
 
  0.865
PBAL39_04788
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion (658 aa)
   
 
  0.865
PBAL39_22065
PfkB domain protein (305 aa)
     
 
  0.838
PBAL39_19659
Putative xylose repressor (406 aa)
 
 
  0.782
PBAL39_23903
ROK (373 aa)
 
 
  0.781
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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