STRINGSTRING
PBAL39_24263 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24263" - Transcriptional regulator in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24263Transcriptional regulator (353 aa)    
Predicted Functional Partners:
PBAL39_19814
Putative bifunctional UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase/alanine racemase (824 aa)
         
  0.852
PBAL39_22065
PfkB domain protein (305 aa)
 
 
  0.775
PBAL39_22130
Putative LacI-family transcriptional regulator, ribose operon repressor (334 aa)
   
          0.774
PBAL39_22635
LacI family transcriptional regulator (340 aa)
   
          0.773
PBAL39_17489
Transcriptional regulator (337 aa)
   
          0.773
PBAL39_14809
LacI family transcriptional regulator (341 aa)
   
          0.771
PBAL39_23622
PfkB domain protein (339 aa)
 
 
  0.745
PBAL39_04129
Probable carbohydrate kinase, PfkB family protein (305 aa)
   
 
  0.708
PBAL39_03202
PfkB domain protein (339 aa)
   
 
  0.708
PBAL39_24268
Uncharacterized protein (218 aa)
              0.619
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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