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PBAL39_24273 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24273" - Putative transcriptional regulator GerE, LuxR family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24273Putative transcriptional regulator GerE, LuxR family protein (254 aa)    
Predicted Functional Partners:
PBAL39_24268
Uncharacterized protein (218 aa)
 
          0.919
PBAL39_24278
Uncharacterized protein (198 aa)
              0.775
PBAL39_25425
Membrane spanning protein, required for outer membrane integrity (526 aa)
   
          0.575
PBAL39_01247
Putative cell surface protein (366 aa)
   
          0.575
PBAL39_25415
Outer membrane assembly protein (422 aa)
   
          0.564
PBAL39_10671
Putative methyltransferase (230 aa)
 
          0.560
PBAL39_25000
Putative zinc protease (424 aa)
   
          0.558
PBAL39_01242
Uncharacterized protein (371 aa)
   
          0.555
PBAL39_14649
Uncharacterized protein (561 aa)
   
          0.550
PBAL39_03409
Outer membrane vitamin B12 receptor protein (670 aa)
   
          0.535
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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