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PBAL39_24293 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24293" - TonB-dependent receptor domain protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24293TonB-dependent receptor domain protein (617 aa)    
Predicted Functional Partners:
PBAL39_24288
Transcriptional regulator, GntR family protein (501 aa)
 
          0.863
PBAL39_03409
Outer membrane vitamin B12 receptor protein (670 aa)
   
          0.727
PBAL39_05783
Biopolymer transport protein (275 aa)
 
  0.669
PBAL39_15334
Glf protein (375 aa)
       
      0.634
PBAL39_02027
Uncharacterized protein (186 aa)
   
          0.629
PBAL39_20830
CDP-alcohol phosphatidyltransferase (241 aa)
   
          0.628
PBAL39_06216
Putative transport related membrane protein (236 aa)
   
  0.600
PBAL39_12227
DNA helicase (1080 aa)
   
        0.595
PBAL39_20725
ABC-type Fe3+-siderophores transport system (264 aa)
       
  0.595
PBAL39_03414
Uncharacterized protein (378 aa)
   
          0.502
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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