STRINGSTRING
PBAL39_24405 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24405" - Shikimate 5-dehydrogenase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24405Shikimate 5-dehydrogenase (247 aa)    
Predicted Functional Partners:
aroK
Shikimate kinase ; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (168 aa)
  0.997
aroC
5-enolpyruvylshikimate-3-phosphate phospholyase ; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (363 aa)
 
  0.964
PBAL39_14519
3-dehydroquinate synthase (358 aa)
 
  0.954
aroQ
Type II DHQase ; Catalyzes a trans-dehydration via an enolate intermediate (139 aa)
 
 
  0.936
aroA
5-enolpyruvylshikimate-3-phosphate synthase ; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate (417 aa)
 
 
  0.922
PBAL39_09241
3-dehydroquinate synthase (392 aa)
 
  0.884
PBAL39_24415
Metallo-beta-lactamase family protein (220 aa)
   
        0.865
PBAL39_24410
Possible gliding motility-related protein (194 aa)
              0.860
PBAL39_24400
(2R)-phospho-3-sulfolactate synthase, comA family protein (234 aa)
              0.833
PBAL39_24420
Putative lipoprotein releasing system transmembrane protein (410 aa)
   
        0.815
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]