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EDM34127.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34127.1" - COG4591 ABC-type transport system, involved in lipoprotein release, permease component in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
EDM34127.1COG4591 ABC-type transport system, involved in lipoprotein release, permease component (410 aa)    
Predicted Functional Partners:
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner; Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family (216 aa)
  0.856
EDM34281.1
ABC transporter, permease; COG4591 ABC-type transport system, involved in lipoprotein release, permease component (406 aa)
   
   
 
0.846
EDM34126.1
Metallo-beta-lactamase family protein; COG0491 Zn-dependent hydrolases, including glyoxylases (220 aa)
 
          0.843
EDM34128.1
annotation not available (121 aa)
              0.814
EDM34124.1
COG0169 Shikimate 5-dehydrogenase (247 aa)
              0.808
EDM34125.1
annotation not available (194 aa)
              0.803
EDM34123.1
(2R)-phospho-3-sulfolactate synthase, comA family protein (234 aa)
              0.790
EDM35817.1
COG4775 Outer membrane protein/protective antigen OMA87 (829 aa)
 
 
  0.728
EDM34581.1
COG0681 Signal peptidase I; Belongs to the peptidase S26 family (400 aa)
   
     
  0.694
EDM38515.1
COG2834 Outer membrane lipoprotein-sorting protein (216 aa)
 
 
  0.692
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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