STRINGSTRING
PBAL39_24475 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24475" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24475Uncharacterized protein (385 aa)    
Predicted Functional Partners:
PBAL39_24480
Glucosamine-6-phosphate deaminase-like protein (639 aa)
 
          0.699
PBAL39_10746
Uncharacterized protein (396 aa)
   
          0.679
PBAL39_06176
Beta-hexosaminidase (552 aa)
 
  0.638
PBAL39_03899
Beta-N-acetylhexosaminidase (635 aa)
 
  0.603
PBAL39_11607
Peptidase S13, D-Ala-D-Ala carboxypeptidase C (448 aa)
 
        0.579
PBAL39_24470
Putative zinc protease (954 aa)
              0.575
PBAL39_13347
Beta-hexosaminidase (813 aa)
 
  0.549
PBAL39_25060
Beta-hexosaminidase (633 aa)
 
  0.529
PBAL39_06441
Beta-hexosaminidase (791 aa)
 
  0.510
PBAL39_10756
Chitinase (330 aa)
   
   
    0.471
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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