STRINGSTRING
PBAL39_24490 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24490" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24490Putative outer membrane protein (1045 aa)    
Predicted Functional Partners:
PBAL39_24495
Uncharacterized protein (434 aa)
              0.818
PBAL39_16439
Uncharacterized protein (544 aa)
 
 
      0.790
PBAL39_18694
Putative outer membrane protein (505 aa)
   
          0.760
PBAL39_23893
Uncharacterized protein (524 aa)
   
          0.759
PBAL39_03524
Uncharacterized protein (513 aa)
   
          0.757
PBAL39_16636
Putative outer membrane protein (486 aa)
   
          0.756
PBAL39_07675
Uncharacterized protein (612 aa)
   
          0.735
PBAL39_24183
Putative outer membrane protein (524 aa)
 
          0.733
PBAL39_05833
Uncharacterized protein (461 aa)
   
          0.733
PBAL39_05853
Putative outer membrane protein (513 aa)
   
          0.701
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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