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PBAL39_24715 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24715" - Putative TonB-dependent outer membrane receptor protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24715Putative TonB-dependent outer membrane receptor protein (925 aa)    
Predicted Functional Partners:
PBAL39_24710
Uncharacterized protein (351 aa)
 
          0.972
PBAL39_22750
Outer membrane efflux protein (483 aa)
   
          0.620
PBAL39_25230
CHU large protein uncharacterized (576 aa)
   
          0.572
PBAL39_12363
Putative acid phosphatase (334 aa)
 
          0.559
PBAL39_17194
Putative outer membrane protein (511 aa)
   
          0.555
PBAL39_17199
Putative outer membrane protein (1015 aa)
   
          0.520
PBAL39_22755
Uncharacterized protein (455 aa)
   
          0.483
PBAL39_15494
Uncharacterized protein (307 aa)
   
          0.469
PBAL39_22760
HlyB/MsbA family ABC transporter (335 aa)
   
          0.453
PBAL39_15864
Peptidase S41 (470 aa)
   
          0.444
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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