STRINGSTRING
PBAL39_24795 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24795" - Putative lipoprotein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24795Putative lipoprotein (295 aa)    
Predicted Functional Partners:
PBAL39_24800
Putative transmembrane protein (251 aa)
              0.568
PBAL39_04413
Putative outer membrane protein (596 aa)
   
          0.534
PBAL39_13270
Putative aminopeptidase (855 aa)
 
        0.492
PBAL39_04418
Uncharacterized protein (1071 aa)
   
          0.480
PBAL39_07195
Uncharacterized protein (397 aa)
   
          0.476
PBAL39_18179
Hemin ABC transporter ATP binding protein (265 aa)
   
        0.465
PBAL39_02157
Uncharacterized protein (161 aa)
   
          0.454
PBAL39_04353
Serine protease / subtilase peptidase (527 aa)
   
          0.430
purL
Formylglycinamide ribonucleotide amidotransferase ; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1222 aa)
              0.412
PBAL39_02442
Lipase/Acylhydrolase (222 aa)
   
        0.409
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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