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rnpA protein (Pedobacter sp. BAL39) - STRING interaction network
"rnpA" - Protein C5 in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
rnpAProtein C5 ; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (145 aa)    
Predicted Functional Partners:
PBAL39_24825
Putative membrane protein insertion efficiency factor ; Could be involved in insertion of integral membrane proteins into the membrane (76 aa)
              0.880
rpmH
50S ribosomal protein L34 (52 aa)
         
  0.835
PBAL39_24830
Putative glycoprotease family exported protein (227 aa)
              0.815
PBAL39_09511
Uroporphyrinogen-III synthase (256 aa)
 
          0.803
PBAL39_08210
Uncharacterized protein (179 aa)
   
          0.702
PBAL39_19649
Possible phosphoribosylformylglycinamidine cyclo-ligase (393 aa)
   
          0.696
PBAL39_25320
Cation-transporting ATPase (118 aa)
   
          0.661
PBAL39_21975
Cell division protein FtsQ (362 aa)
   
          0.625
PBAL39_03929
Uncharacterized protein (383 aa)
   
          0.613
PBAL39_00425
Uncharacterized protein (832 aa)
   
          0.607
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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