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PBAL39_24870 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24870" - Mn-dependent transcriptional regulator in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
PBAL39_24870Mn-dependent transcriptional regulator (217 aa)    
Predicted Functional Partners:
mntH
Divalent metal cation transporter MntH ; H(+)-stimulated, divalent metal cation uptake system (619 aa)
       
  0.945
PBAL39_24875
Transcriptional regulator, AsnC family protein (156 aa)
              0.617
smpB
Small protein B ; Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a "tag peptide", a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to tra [...] (149 aa)
              0.586
PBAL39_22380
ABC transporter, ATP-binding subunit ; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (245 aa)
       
      0.527
PBAL39_23707
Oxidoreductase domain protein (360 aa)
       
      0.444
PBAL39_16951
Glucose-fructose oxidoreductase (373 aa)
       
      0.444
PBAL39_14429
Putative dehydrogenase (461 aa)
       
      0.444
PBAL39_10226
Putative oxidoreductase (339 aa)
       
      0.444
PBAL39_03849
Oxidoreductase-dehydrogenase (379 aa)
       
      0.444
PBAL39_02387
Putative hydrogenase (399 aa)
       
      0.444
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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