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PBAL39_24875 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24875" - Transcriptional regulator, AsnC family protein in Pedobacter sp. BAL39
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
PBAL39_24875Transcriptional regulator, AsnC family protein (156 aa)    
Predicted Functional Partners:
mntH
Divalent metal cation transporter MntH ; H(+)-stimulated, divalent metal cation uptake system (619 aa)
              0.619
PBAL39_24870
Mn-dependent transcriptional regulator (217 aa)
              0.617
PBAL39_12067
Ornithine carbamoyltransferase (320 aa)
       
  0.500
PBAL39_02102
Glutamate synthase, large subunit (1182 aa)
   
   
  0.453
PBAL39_25055
Thioredoxin-disulfide reductase (310 aa)
   
      0.448
PBAL39_16961
FAD-dependent pyridine nucleotide-disulphide oxidoreductase (401 aa)
   
      0.448
PBAL39_16489
Thioredoxin reductase carring response regulator receiver domain (555 aa)
   
      0.448
PBAL39_01517
Non-ribosomal peptide synthetase/polyketide synthase (2233 aa)
         
  0.443
PBAL39_18414
DNA polymerase III, epsilon subunit (456 aa)
   
        0.437
smpB
Small protein B ; Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a "tag peptide", a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to tra [...] (149 aa)
              0.426
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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