STRINGSTRING
PBAL39_24885 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24885" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24885Uncharacterized protein (169 aa)    
Predicted Functional Partners:
ung
Uracil-DNA glycosylase ; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (225 aa)
              0.859
PBAL39_14919
Adenylate cyclase-related protein (373 aa)
   
          0.735
PBAL39_01167
WD40-like repeat/amidohydrolase domain protein (1080 aa)
   
          0.673
PBAL39_24890
Lysyl-tRNA synthetase (166 aa)
 
          0.635
PBAL39_10930
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain, putative (816 aa)
   
          0.631
PBAL39_11717
Dipeptidyl-peptidase (795 aa)
   
          0.555
PBAL39_10686
Uncharacterized protein (584 aa)
 
          0.541
PBAL39_23382
Putative hydrolase (275 aa)
   
          0.498
PBAL39_22670
Uncharacterized protein (328 aa)
   
          0.459
PBAL39_20510
Uncharacterized protein (668 aa)
   
          0.454
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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