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PBAL39_24890 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24890" - Lysyl-tRNA synthetase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24890Lysyl-tRNA synthetase (166 aa)    
Predicted Functional Partners:
PBAL39_06226
Uncharacterized protein (271 aa)
   
          0.776
PBAL39_06021
Uncharacterized protein (205 aa)
   
          0.769
PBAL39_13492
Uncharacterized protein (243 aa)
   
          0.766
PBAL39_04798
Uncharacterized protein (194 aa)
   
          0.760
PBAL39_21475
Uncharacterized protein (342 aa)
   
          0.750
PBAL39_10131
Uncharacterized protein (122 aa)
   
          0.744
PBAL39_08445
30S ribosomal protein S10 (231 aa)
   
          0.733
PBAL39_06906
Uncharacterized protein (218 aa)
   
          0.716
PBAL39_10975
Uncharacterized protein (250 aa)
   
          0.709
PBAL39_10221
Uncharacterized protein (117 aa)
 
          0.703
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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