STRINGSTRING
PBAL39_24935 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24935" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24935Uncharacterized protein (392 aa)    
Predicted Functional Partners:
PBAL39_13507
Phosphomannomutase (462 aa)
 
 
  0.863
PBAL39_09611
dTDP-4-dehydrorhamnose 3,5-epimerase (184 aa)
   
  0.831
PBAL39_24950
UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (451 aa)
       
    0.778
PBAL39_23037
Uncharacterized protein (400 aa)
   
  0.773
PBAL39_21375
Putative glycosyltransferase (317 aa)
   
  0.773
PBAL39_10461
Putative LPS biosynthesis related glycosyltransferase (267 aa)
   
  0.773
PBAL39_10451
Putative LPS biosynthesis related glycosyltransferase (246 aa)
   
  0.773
PBAL39_10441
Glycosyl transferase, family 2 (263 aa)
   
  0.773
PBAL39_10436
Glycosyl transferase, family 2 (269 aa)
   
  0.773
PBAL39_05588
Putative glycosyltransferase (249 aa)
   
  0.773
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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