STRINGSTRING
PBAL39_24955 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24955" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24955Uncharacterized protein (108 aa)    
Predicted Functional Partners:
PBAL39_10141
Possible transcriptional regulator (86 aa)
   
          0.764
PBAL39_24950
UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (451 aa)
              0.712
PBAL39_09296
Uncharacterized protein (234 aa)
   
          0.605
prmA
Ribosomal protein L11 methyltransferase (279 aa)
              0.568
tpiA
Triose-phosphate isomerase ; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (260 aa)
              0.568
PBAL39_08951
Uncharacterized protein (452 aa)
   
          0.513
PBAL39_24935
Uncharacterized protein (392 aa)
              0.479
PBAL39_10975
Uncharacterized protein (250 aa)
   
          0.464
PBAL39_10980
Uncharacterized protein (349 aa)
   
          0.444
PBAL39_08225
Uncharacterized protein (669 aa)
   
          0.444
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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