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STRINGSTRING
EDM36577.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36577.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36577.1Uncharacterized protein; COG1396 Predicted transcriptional regulators (108 aa)    
Predicted Functional Partners:
EDM36145.1
Uncharacterized protein; COG1011 Predicted hydrolase (HAD superfamily) (202 aa)
   
          0.741
EDM37227.1
annotation not available (326 aa)
   
          0.711
EDM36576.1
COG0773 UDP-N-acetylmuramate-alanine ligase (451 aa)
              0.700
EDM36452.1
annotation not available (237 aa)
   
          0.699
EDM35050.1
annotation not available (669 aa)
   
          0.694
EDM35616.1
annotation not available (134 aa)
   
          0.665
EDM38750.1
Uncharacterized protein; COG3920 Signal transduction histidine kinase (99 aa)
   
          0.663
EDM38256.1
annotation not available (65 aa)
   
          0.663
EDM34515.1
annotation not available (250 aa)
   
          0.639
EDM35749.1
COG1629 Outer membrane receptor proteins, mostly Fe transport (566 aa)
   
          0.636
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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