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PBAL39_24970 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24970" - Diguanylate cyclase/phosphodiesterase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24970Diguanylate cyclase/phosphodiesterase (984 aa)    
Predicted Functional Partners:
PBAL39_24975
Response regulator (259 aa)
 
 
  0.990
PBAL39_18754
Response regulator (251 aa)
 
 
  0.936
PBAL39_02517
Two-component response regulator (248 aa)
 
 
  0.934
PBAL39_18474
Two-component system response regulator (253 aa)
 
 
  0.933
PBAL39_24810
Transcriptional regulator, LytR/AlgR family protein (245 aa)
 
 
  0.931
PBAL39_02830
Response regulator (246 aa)
 
 
  0.931
PBAL39_17629
Two-component system response regulator (244 aa)
 
 
  0.930
PBAL39_19824
Response regulator (240 aa)
 
 
  0.930
PBAL39_17744
Putative response regulator (253 aa)
 
 
  0.930
PBAL39_13907
Response regulator (247 aa)
 
 
  0.928
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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