STRINGSTRING
PBAL39_24980 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_24980" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_24980Uncharacterized protein (233 aa)    
Predicted Functional Partners:
PBAL39_24985
Uncharacterized protein (280 aa)
 
       
0.884
PBAL39_08796
Uncharacterized protein (292 aa)
   
          0.715
PBAL39_20965
Uncharacterized protein (485 aa)
   
          0.652
PBAL39_22175
Uncharacterized protein (268 aa)
   
          0.638
PBAL39_20960
Putative outer membrane protein (1104 aa)
   
          0.626
PBAL39_15584
Possible sugar nucleotide epimerase (326 aa)
   
          0.576
PBAL39_22897
Uncharacterized protein (462 aa)
   
          0.571
PBAL39_00085
Outer membrane receptor ragA protein (602 aa)
   
          0.559
PBAL39_06656
Uncharacterized protein (459 aa)
   
          0.542
PBAL39_23537
Uncharacterized protein (1746 aa)
   
          0.534
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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