STRINGSTRING
PBAL39_25010 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25010" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25010Uncharacterized protein (667 aa)    
Predicted Functional Partners:
PBAL39_25005
Uncharacterized protein (638 aa)
 
          0.976
PBAL39_01092
Uncharacterized protein (635 aa)
 
          0.841
PBAL39_03739
Uncharacterized protein (816 aa)
   
          0.767
PBAL39_18009
Uncharacterized protein (140 aa)
   
          0.699
PBAL39_12282
Uncharacterized protein (340 aa)
   
          0.683
PBAL39_24028
Uncharacterized protein (206 aa)
   
          0.642
PBAL39_00300
TonB-dependent siderophore receptor (813 aa)
   
          0.636
PBAL39_08931
Uncharacterized protein (434 aa)
   
          0.614
PBAL39_18369
Uncharacterized protein (926 aa)
   
          0.603
PBAL39_01602
Uncharacterized protein (178 aa)
   
          0.589
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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