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PBAL39_25030 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25030" - Putative transport-related membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25030Putative transport-related membrane protein (531 aa)    
Predicted Functional Partners:
PBAL39_25025
Putative multidrug resistance protein (354 aa)
 
          0.968
PBAL39_25020
Uncharacterized protein (445 aa)
 
          0.966
PBAL39_07515
Multidrug resistance protein A (349 aa)
 
          0.778
PBAL39_11747
Multidrug resistance protein A (347 aa)
 
          0.766
PBAL39_07675
Uncharacterized protein (612 aa)
   
          0.756
PBAL39_25015
Transcriptional regulator, AraC family protein (271 aa)
 
          0.722
PBAL39_02720
Uncharacterized protein (357 aa)
   
          0.670
PBAL39_18834
Uncharacterized protein (382 aa)
   
          0.653
PBAL39_23117
Uncharacterized protein (270 aa)
   
          0.619
PBAL39_14054
Putative transmembrane protein (297 aa)
   
          0.577
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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