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PBAL39_25070 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25070" - Transcriptional regulator, LuxR family protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25070Transcriptional regulator, LuxR family protein (210 aa)    
Predicted Functional Partners:
PBAL39_25075
Uncharacterized protein (982 aa)
 
   
    0.945
PBAL39_20535
Membrane-associated sensory histidine kinase-like ATPase (239 aa)
 
  0.945
PBAL39_21865
Uncharacterized protein (261 aa)
 
  0.944
PBAL39_17329
Putative transmembrane protein (745 aa)
 
  0.942
PBAL39_18244
Histidine kinase sensor protein (785 aa)
 
  0.793
PBAL39_25550
Multi-sensor Signal Transduction Histidine Kinase (737 aa)
   
  0.764
PBAL39_25300
Multisensor diguanylate cyclase/phosphodiesterase (266 aa)
   
  0.764
PBAL39_24750
Phosphoglycerate transport protein for signal transmission (716 aa)
   
  0.764
PBAL39_24745
Two-component sensor histidine kinase (361 aa)
   
  0.764
PBAL39_24620
Two-component sensor histidine kinase (1147 aa)
   
  0.764
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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