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PBAL39_25145 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25145" - ABC transporter, ATP-binding protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25145ABC transporter, ATP-binding protein (571 aa)    
Predicted Functional Partners:
PBAL39_09371
Oligopeptide ABC transporter, permease (363 aa)
 
  0.957
PBAL39_03924
Dipeptide ABC transporter, permease component (351 aa)
  0.949
PBAL39_23943
Oligopeptide ABC transporter substrate-binding protein (540 aa)
 
 
  0.947
PBAL39_25150
Uncharacterized protein (438 aa)
              0.647
PBAL39_07860
Asparaginase family protein (353 aa)
 
   
  0.611
PBAL39_10366
Asparaginase (280 aa)
 
   
  0.606
PBAL39_01712
Asparaginase (343 aa)
 
   
  0.606
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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