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PBAL39_25160 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25160" - UPF0234 protein PBAL39_25160 in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25160UPF0234 protein PBAL39_25160 (163 aa)    
Predicted Functional Partners:
PBAL39_25155
Uncharacterized protein (150 aa)
 
          0.883
PBAL39_25165
Polyphosphate kinase (276 aa)
              0.573
trpF
N-(5’-phosphoribosyl)anthranilate isomerase (224 aa)
       
    0.516
PBAL39_07115
Phenylalanyl-tRNA synthetase beta subunit (799 aa)
 
          0.501
PBAL39_01027
CinA-like protein (415 aa)
              0.442
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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