STRINGSTRING
PBAL39_25220 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25220" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25220Uncharacterized protein (315 aa)    
Predicted Functional Partners:
PBAL39_25215
Uncharacterized protein (338 aa)
 
          0.963
PBAL39_25210
Possible oxidoreductase (376 aa)
              0.779
PBAL39_25205
SAM-dependent methyltransferase (245 aa)
              0.779
PBAL39_25200
Chalcone/stilbene synthase family protein (350 aa)
              0.779
PBAL39_25225
Uncharacterized protein (232 aa)
              0.763
PBAL39_04333
Uncharacterized protein (350 aa)
   
          0.727
PBAL39_17549
Uncharacterized protein (316 aa)
 
          0.725
PBAL39_25230
CHU large protein uncharacterized (576 aa)
          0.720
PBAL39_24780
Uncharacterized protein (339 aa)
   
          0.719
PBAL39_24455
Histidine kinase (1225 aa)
   
          0.708
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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