STRINGSTRING
PBAL39_25280 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25280" - Cell wall surface anchor family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25280Cell wall surface anchor family protein (1026 aa)    
Predicted Functional Partners:
PBAL39_25285
CHU large protein uncharacterized (251 aa)
              0.859
PBAL39_25275
Uncharacterized protein (1729 aa)
 
       
0.634
PBAL39_06626
Uncharacterized protein (149 aa)
   
          0.519
PBAL39_17564
CHU large protein candidate retaining b-glycosidase, glycoside hydrolase family 5 protein (1640 aa)
   
          0.416
PBAL39_06681
Transcriptional regulator, AraC family protein (268 aa)
   
          0.404
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]