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EDM36642.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36642.1" - Cell wall surface anchor family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36642.1Cell wall surface anchor family protein; COG3210 Large exoproteins involved in heme utilization or adhesion (1026 aa)    
Predicted Functional Partners:
EDM36643.1
annotation not available (251 aa)
 
        0.867
EDM36287.1
Cell wall surface anchor family protein; COG0419 ATPase involved in DNA repair (317 aa)
   
        0.674
EDM36641.1
COG3210 Large exoproteins involved in heme utilization or adhesion (1729 aa)
 
   
0.651
EDM34613.1
COG2911 Uncharacterized protein conserved in bacteria (1473 aa)
   
  0.618
EDM34350.1
annotation not available (451 aa)
   
          0.582
EDM37766.1
Uncharacterized protein; COG2755 Lysophospholipase L1 and related esterases (261 aa)
   
          0.505
EDM37205.1
Transporter, MFS superfamily protein; COG0477 Permeases of the major facilitator superfamily (431 aa)
   
        0.449
EDM38053.1
annotation not available (492 aa)
   
        0.440
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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