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PBAL39_25320 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25320" - Cation-transporting ATPase in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25320Cation-transporting ATPase (118 aa)    
Predicted Functional Partners:
PBAL39_25345
Possible component of copper transport system (401 aa)
          0.853
PBAL39_24410
Possible gliding motility-related protein (194 aa)
   
          0.708
PBAL39_11155
Uncharacterized protein (155 aa)
 
            0.678
PBAL39_25340
Possible component of copper transport system (394 aa)
          0.677
rnpA
Protein C5 ; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (145 aa)
   
          0.661
PBAL39_25305
Cation-transporting ATPase possible copper-exporting ATPase (737 aa)
       
    0.659
PBAL39_25330
Heavy metal efflux pump protein (656 aa)
              0.620
PBAL39_25325
Heavy metal efflux pump protein (423 aa)
              0.620
PBAL39_25335
Uncharacterized protein (424 aa)
              0.615
PBAL39_25315
Uncharacterized protein (132 aa)
              0.601
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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