STRINGSTRING
PBAL39_25345 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25345" - Possible component of copper transport system in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25345Possible component of copper transport system (401 aa)    
Predicted Functional Partners:
PBAL39_25325
Heavy metal efflux pump protein (423 aa)
  0.998
PBAL39_25330
Heavy metal efflux pump protein (656 aa)
 
  0.995
PBAL39_13085
Cation efflux system protein czcA (1043 aa)
 
  0.984
PBAL39_18459
Cation efflux protein (1469 aa)
 
  0.984
PBAL39_11245
Cation efflux protein (1461 aa)
 
  0.983
PBAL39_25340
Possible component of copper transport system (394 aa)
 
   
 
0.941
PBAL39_25350
Uncharacterized protein (191 aa)
          0.934
PBAL39_25335
Uncharacterized protein (424 aa)
              0.856
PBAL39_25320
Cation-transporting ATPase (118 aa)
          0.853
PBAL39_01602
Uncharacterized protein (178 aa)
          0.770
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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