STRINGSTRING
PBAL39_25425 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25425" - Membrane spanning protein, required for outer membrane integrity in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25425Membrane spanning protein, required for outer membrane integrity (526 aa)    
Predicted Functional Partners:
PBAL39_25415
Outer membrane assembly protein (422 aa)
 
          0.974
PBAL39_24360
Uncharacterized protein (474 aa)
   
          0.765
PBAL39_24355
Uncharacterized protein (1204 aa)
   
          0.726
PBAL39_00015
Uncharacterized protein (267 aa)
   
          0.709
PBAL39_06516
Lysine exporter protein (LYSE/YGGA) (207 aa)
   
          0.698
PBAL39_12438
Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase) (176 aa)
   
          0.683
PBAL39_03769
Uncharacterized protein (964 aa)
   
          0.679
PBAL39_02177
Uncharacterized protein (360 aa)
   
          0.677
PBAL39_04338
CHU large protein uncharacterized (3896 aa)
   
          0.671
PBAL39_03629
Uncharacterized protein (176 aa)
   
          0.671
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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