STRINGSTRING
EDM36682.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36682.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36682.1Uncharacterized protein (118 aa)    
Predicted Functional Partners:
EDM38439.1
HAD-superfamily hydrolase, subfamily IIB; COG0380 Trehalose-6-phosphate synthase (733 aa)
     
        0.841
EDM34746.1
Uncharacterized protein (111 aa)
   
          0.750
EDM36681.1
annotation not available (25 aa)
              0.574
EDM36680.1
Putative FNR-family transcriptional regulator protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases (241 aa)
              0.574
EDM34794.1
Putative HlyD-family transporter; COG0845 Membrane-fusion protein (435 aa)
   
        0.480
EDM36683.1
Transcriptional regulator, MerR family protein; COG0789 Predicted transcriptional regulators (299 aa)
   
        0.404
EDM35484.1
COG2764 Uncharacterized protein conserved in bacteria (142 aa)
   
        0.401
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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