STRINGSTRING
PBAL39_25500 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25500" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25500Uncharacterized protein (168 aa)    
Predicted Functional Partners:
PBAL39_25510
Beta-carotene hydroxylase (160 aa)
 
          0.878
PBAL39_25505
Putative isopentenyl-diphosphate delta-isomerase (173 aa)
              0.861
PBAL39_25490
Phytoene dehydrogenase (Phytoene desaturase) (500 aa)
              0.818
PBAL39_25495
Phytoene synthase (278 aa)
              0.815
PBAL39_25485
Transcriptional regulator, MerR family protein (299 aa)
              0.815
PBAL39_25515
Uncharacterized protein (767 aa)
              0.679
PBAL39_07475
Uncharacterized protein (600 aa)
   
          0.652
PBAL39_17809
Putative periplasmic protein (146 aa)
   
          0.586
PBAL39_20139
Cyclic nucleotide binding-regulatory protein (94 aa)
   
          0.526
PBAL39_13999
Uncharacterized protein (402 aa)
   
          0.524
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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