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EDM36701.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36701.1" - COG1629 Outer membrane receptor proteins, mostly Fe transport in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36701.1COG1629 Outer membrane receptor proteins, mostly Fe transport (762 aa)    
Predicted Functional Partners:
EDM35130.1
COG3182 Uncharacterized iron-regulated membrane protein (449 aa)
 
        0.624
EDM35571.1
COG3182 Uncharacterized iron-regulated membrane protein (448 aa)
 
        0.614
EDM34168.1
COG3182 Uncharacterized iron-regulated membrane protein (363 aa)
   
        0.602
EDM34674.1
COG3182 Uncharacterized iron-regulated membrane protein (371 aa)
 
        0.581
EDM36702.1
Ion channel protein; COG0668 Small-conductance mechanosensitive channel (262 aa)
   
        0.516
EDM34202.1
COG3182 Uncharacterized iron-regulated membrane protein (246 aa)
 
        0.490
EDM36700.1
Sensor for ctr capsule biosynthesis sensor histidine kinase; COG2202 FOG- PAS/PAC domain (815 aa)
              0.425
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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