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EDM36704.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36704.1" - COG1858 Cytochrome c peroxidase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36704.1COG1858 Cytochrome c peroxidase (376 aa)    
Predicted Functional Partners:
EDM36705.1
annotation not available (204 aa)
              0.845
EDM36706.1
annotation not available (476 aa)
              0.727
EDM36708.1
Putative transmembrane sensor/regulatory protein; COG3712 Fe2+-dicitrate sensor, membrane component (335 aa)
              0.720
EDM36707.1
COG1629 Outer membrane receptor proteins, mostly Fe transport (1095 aa)
              0.720
EDM36709.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog (179 aa)
              0.483
EDM36703.1
B-glycosidase, glycoside hydrolase family 16 protein; COG2273 Beta-glucanase/Beta-glucan synthetase (294 aa)
              0.481
EDM37409.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing (1035 aa)
 
   
  0.442
EDM36793.1
COG0348 Polyferredoxin (464 aa)
 
 
  0.426
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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