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PBAL39_25600 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_25600" - Putative outer membrane receptor protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_25600Putative outer membrane receptor protein (476 aa)    
Predicted Functional Partners:
PBAL39_25605
Uncharacterized protein (1095 aa)
 
          0.961
PBAL39_25610
Putative transmembrane sensor/regulatory protein (335 aa)
 
          0.856
PBAL39_24505
Outer membrane protein Omp121 (1022 aa)
   
          0.773
PBAL39_16781
Putative outer membrane protein (1030 aa)
   
          0.773
PBAL39_18970
Putative outer membrane protein (970 aa)
   
          0.771
PBAL39_12398
Putative outer membrane protein (1038 aa)
   
          0.771
PBAL39_00270
Putative TonB-linked outer membrane receptor protein (1103 aa)
   
          0.771
PBAL39_22887
Putative outer membrane protein (1055 aa)
   
          0.770
PBAL39_15099
Putative outer membrane protein (1105 aa)
   
          0.770
PBAL39_13310
Putative outer membrane protein (1009 aa)
   
          0.767
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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