Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDM82371.1 | EDM82406.1 | LMED105_11035 | LMED105_15079 | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | COG2199 FOG: GGDEF domain. | 0.997 |
| EDM82371.1 | EDM82882.1 | LMED105_11035 | LMED105_10400 | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein; COG0642 Signal transduction histidine kinase. | 0.998 |
| EDM82371.1 | EDM83079.1 | LMED105_11035 | LMED105_00712 | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | Hpt sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase. | 0.998 |
| EDM82371.1 | EDM83106.1 | LMED105_11035 | LMED105_00847 | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain. | 0.981 |
| EDM82371.1 | EDM83854.1 | LMED105_11035 | LMED105_08495 | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | GGDEF; COG2199 FOG: GGDEF domain. | 0.999 |
| EDM82371.1 | EDM84059.1 | LMED105_11035 | LMED105_13823 | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | Aerotaxis receptor; COG2202 FOG: PAS/PAC domain. | 0.997 |
| EDM82371.1 | EDM84331.1 | LMED105_11035 | LMED105_02173 | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain. | 0.998 |
| EDM82371.1 | EDM84593.1 | LMED105_11035 | LMED105_03560 | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | COG0642 Signal transduction histidine kinase. | 0.998 |
| EDM82371.1 | EDM84758.1 | LMED105_11035 | LMED105_04397 | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | PAS/PAC domain protein; COG0642 Signal transduction histidine kinase. | 0.998 |
| EDM82406.1 | EDM82371.1 | LMED105_15079 | LMED105_11035 | COG2199 FOG: GGDEF domain. | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | 0.997 |
| EDM82406.1 | EDM82882.1 | LMED105_15079 | LMED105_10400 | COG2199 FOG: GGDEF domain. | Hypothetical protein; COG0642 Signal transduction histidine kinase. | 0.994 |
| EDM82406.1 | EDM83079.1 | LMED105_15079 | LMED105_00712 | COG2199 FOG: GGDEF domain. | Hpt sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase. | 0.997 |
| EDM82406.1 | EDM83106.1 | LMED105_15079 | LMED105_00847 | COG2199 FOG: GGDEF domain. | Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain. | 0.972 |
| EDM82406.1 | EDM83854.1 | LMED105_15079 | LMED105_08495 | COG2199 FOG: GGDEF domain. | GGDEF; COG2199 FOG: GGDEF domain. | 0.991 |
| EDM82406.1 | EDM84056.1 | LMED105_15079 | LMED105_13808 | COG2199 FOG: GGDEF domain. | COG3215 Tfp pilus assembly protein PilZ. | 0.632 |
| EDM82406.1 | EDM84059.1 | LMED105_15079 | LMED105_13823 | COG2199 FOG: GGDEF domain. | Aerotaxis receptor; COG2202 FOG: PAS/PAC domain. | 0.878 |
| EDM82406.1 | EDM84331.1 | LMED105_15079 | LMED105_02173 | COG2199 FOG: GGDEF domain. | Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain. | 0.797 |
| EDM82406.1 | EDM84593.1 | LMED105_15079 | LMED105_03560 | COG2199 FOG: GGDEF domain. | COG0642 Signal transduction histidine kinase. | 0.998 |
| EDM82406.1 | EDM84758.1 | LMED105_15079 | LMED105_04397 | COG2199 FOG: GGDEF domain. | PAS/PAC domain protein; COG0642 Signal transduction histidine kinase. | 0.998 |
| EDM82882.1 | EDM82371.1 | LMED105_10400 | LMED105_11035 | Hypothetical protein; COG0642 Signal transduction histidine kinase. | Sensor histidine kinase; COG0477 Permeases of the major facilitator superfamily. | 0.998 |
page 1 of 5