STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM82544.1Phosphonate ABC transporter, inner membrane subunit; COG3639 ABC-type phosphate/phosphonate transport system, permease component. (293 aa)    
Predicted Functional Partners:
EDM82545.1
Phosphonate-binding periplasmic protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
 
 
 0.960
phnC-2
Phosphonate ABC transporter PhnC, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
     0.945
EDM83416.1
ABC transporter related protein; COG3638 ABC-type phosphate/phosphonate transport system, ATPase component.
 
 0.866
EDM84615.1
COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
 
 
 0.853
EDM83417.1
Phosphonate-binding periplasmic protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
 
 
 0.851
phnC
ABC transporter related protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  0.843
EDM82542.1
Hypothetical protein.
       0.773
EDM82546.1
DedA; COG0586 Uncharacterized membrane-associated protein.
  
    0.473
EDM82617.1
COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
 
 
 0.435
Your Current Organism:
Limnobacter sp. MED105
NCBI taxonomy Id: 391597
Other names: L. sp. MED105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.