STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP72188.1Putative peptidase, M28 family protein; COG2234 Predicted aminopeptidases. (335 aa)    
Predicted Functional Partners:
EDP72187.1
3-oxoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.777
EDP72189.1
Dihydrolipoyllysine-residue acetyltransferase (dihydrolipoamide S-acetyltransferase); COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
    
  0.582
pdhA
Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
       0.550
EDP72186.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
     0.544
EDP70688.1
Hypothetical protein; COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
     0.494
EDP72184.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
       0.472
EDP72185.1
Hypothetical protein.
       0.472
EDP72183.1
HAD-superfamily hydrolase subfamily IA, variant 3; COG0637 Predicted phosphatase/phosphohexomutase.
  
    0.455
EDP72181.1
Hypothetical protein.
       0.437
EDP72180.1
COG0836 Mannose-1-phosphate guanylyltransferase.
       0.432
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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