STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_1478PFAM: inner-membrane translocator; KEGG: psb:Psyr_0774 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (322 aa)    
Predicted Functional Partners:
Veis_1479
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll7666 ABC transporter, ATP-binding protein.
 
 0.947
Veis_1480
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rle:pRL90225 putative binding periplasmic protein of ABC transporter.
 
 0.922
Veis_2682
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bcz:BCZK0579 ribose ABC transporter, ribose-binding protein.
 
 0.837
Veis_2079
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20856 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
 
 
 0.836
Veis_3419
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecp:ECP_3346 putative sugar uptake ABC transporter periplasmic solute-binding protein.
 
 0.833
Veis_1675
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_02467 ABC-type sugar transport system, periplasmic component.
 
 0.828
Veis_3598
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb21377 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
 
 
 0.822
Veis_2044
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bms:BR1630 sugar-binding transcriptional regulator, LacI family.
 
 
 0.814
Veis_1477
PFAM: aryldialkylphosphatase; KEGG: psb:Psyr_0773 aryldialkylphosphatase.
 
     0.810
Veis_2026
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A4340 ABC sugar transporter, periplasmic ligand binding protein.
 
 0.797
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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