STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_1926TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV3086 histidine transport system permease protein. (228 aa)    
Predicted Functional Partners:
Veis_0338
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1521 ABC transporter related.
 
 
 0.976
Veis_0335
PFAM: extracellular solute-binding protein, family 3; KEGG: ppr:PBPRB1128 hypothetical amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 0.960
Veis_1927
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV3087 histidine transport system membrane protein M.
 
 
0.926
Veis_1928
PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mlr0549 probable amino acid binding protein of ABC transporter; Belongs to the bacterial solute-binding protein 3 family.
 
 0.910
Veis_0336
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_4520 arginine/ornithine ABC transporter, permease protein.
  
  
 
0.905
Veis_1930
ABC-type histidine transport system ATPase component-like protein; KEGG: pau:PA14_52750 arginine/ornithine transport protein AotP.
 
  
 0.786
Veis_1706
PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: reu:Reut_B3699 extracellular solute-binding protein, family 3.
 
 0.779
Veis_1925
KEGG: vpa:VPA0708 putative acetyltransferase.
       0.773
Veis_3016
PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: reu:Reut_A1594 extracellular solute-binding protein, family 3.
 
 0.765
Veis_1982
PFAM: extracellular solute-binding protein, family 3; KEGG: bam:Bamb_6460 extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.763
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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