STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Veis_2044PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bms:BR1630 sugar-binding transcriptional regulator, LacI family. (358 aa)    
Predicted Functional Partners:
Veis_2045
PFAM: inner-membrane translocator; KEGG: psp:PSPPH_2728 ribose ABC transporter, ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
Veis_2046
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bma:BMAA1814 sugar ABC transporter, ATP-binding protein.
 
 0.977
Veis_0055
PFAM: inner-membrane translocator; KEGG: rso:RSc1243 probable sugar transmembrane ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.827
Veis_1478
PFAM: inner-membrane translocator; KEGG: psb:Psyr_0774 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.814
Veis_3417
PFAM: inner-membrane translocator; KEGG: ecp:ECP_3344 putative sugar uptake ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.812
Veis_2023
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A4343 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.808
Veis_0888
PFAM: inner-membrane translocator; KEGG: sme:SMa1418 putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.807
Veis_2077
PFAM: inner-membrane translocator; KEGG: sme:SMc02452 putative transport system permease ABC transporter protein.
 
 
 0.807
Veis_4326
PFAM: inner-membrane translocator; KEGG: rru:Rru_A1335 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.805
Veis_2024
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A4342 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.803
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.