STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pncBNicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. (406 aa)    
Predicted Functional Partners:
Veis_0861
Nicotinamidase; PFAM: isochorismatase hydrolase; KEGG: bja:bll0677 bifunctional pyrazinamidase/nicotinamidase.
 
 
 0.975
Veis_4845
TIGRFAM: cytidyltransferase-related domain; PFAM: NUDIX hydrolase; cytidylyltransferase; KEGG: syc:syc1306_c nicotinamide-nucleotide adenylyltransferase / ADP compounds hydrolase.
 
  
 0.957
Veis_0581
PFAM: CinA domain protein; KEGG: pol:Bpro_4476 CinA-like; Belongs to the CinA family.
  
 
 0.926
Veis_1027
PFAM: NUDIX hydrolase; KEGG: pol:Bpro_3725 NUDIX hydrolase.
    
 0.917
surE
3'-nucleotidase / 5'-nucleotidase / exopolyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.905
Veis_1630
PFAM: 5-nucleotidase; KEGG: rfr:Rfer_0734 5-nucleotidase.
     
  0.900
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.679
Veis_2066
PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_2141 thioesterase superfamily.
  
    0.610
Veis_2068
KEGG: pol:Bpro_3079 putative transmembrane protein.
 
     0.589
Veis_2069
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: pol:Bpro_3078 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
 
  
 0.544
Your Current Organism:
Verminephrobacter eiseniae
NCBI taxonomy Id: 391735
Other names: V. eiseniae EF01-2, Verminephrobacter eiseniae EF01-2, Verminephrobacter eiseniae str. EF01-2, Verminephrobacter eiseniae strain EF01-2
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